microscope

Imaging

The LCI provides access to optical imaging equipment, from sample preparation to image analysis. We also provide design services and collaboration for imaging technology and devices.

Microscopes

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Images will be provided shortly. 


Image of Nikon A1+R

Ambreen Akhtar

Image of NikonA1+R

Ambreen Akhtar

Type: Inverted Confocal Fluorescence

Modalities: 4-channel fluorescence confocal (Resonant or Galvano scanning), 32-channel spectral confocal (Galvano scanning), transmission and DIC

Special Features: 

  • Resonant scanner – 30 frames per second full frame up to 100’s of frames per second for smaller areas, also allows rapid acquisition of large volumes or observation of rapid live events
  • Spectral detector – 32 channel visible spectrum scanning for samples with complex emission profiles, super-multichannel imaging
  • Hybrid scanning utilizing Galvo scanners to stimulate an area while imaging at high speed with Resonant scanners
  • Perfect Focus automatic focus lock system for long-term imaging
  • Wide variety of objective lenses available from long-working distance for thick samples to high resolution oil lenses for cells and thin sections
  • Continuously variable pinhole – can balance signal vs. resolution for dim or thick samples
  • Stage-top incubator system for live samples including temperature and CO2 control
  • Automated tiling for large area samples
  • Transmitted Laser absorption and DIC imaging
  • Low laser exposure for less photobleaching/photodamage
  • Free downloadable Nikon Elements Viewer for data review and 3D reconstruction

Optimized for:

  • Live samples (cells, organoids, tissue)
  • New sample exploration, dye screening, protocol development
  • Organoids, thick tissue
  • Spectral imaging for autofluorescence reduction and overlapping fluorophores
  • Large area/volume acquisition

Technical Specifications:

  • Point scan confocal 15-420 FPS (Resonant), up to 10 FPS (Galvano)
  • 2k x 2k resolution (Galvo), 1k x 1k resolution (Resonant)
  • 405, 488, 561, 640nm laser lines
  • High sensitivity GaAsP detectors (Blue/Green), extended red sensitivity detectors (Red/Far Red)
     
Picture of Bergamo Multiphoton

Ambreen Akhtar

Type: Articulated Upright Multi-Axis in-vivo Multiphoton Microscope

Modalities: Two-photon (2P), Second harmonic generation (SHG)

Special Features: 

  • Articulated body can rotate +/-45 degrees around sample, capable of traveling over large regions for imaging large samples or areas, or addressing multiple samples in an array
  • Resonant scanner – 30 frames per second full frame up to 100’s of frames per second for smaller areas, also allows rapid acquisition of large volumes or observation of rapid live events
  • Adaptable stage for large or uniquely-shaped samples, whole live animal support
  • Semi-automated power compensation for deep tissue imaging for photodamage reduction and improved depth penetration
  • Fast-tuning Ti:Saph laser can switch wavelengths quickly during an experiment
  • Four-channel GaAsP detector array for Blue/Green/Red/Far Red fluorophores or SHG
  • Dipping objective lenses optimized for thick samples such as organoids, tissue, spheroids, and aggregates
  • Automated tiling for large area imaging, 3D point visiting

Optimized for:

  • Thick samples (organoids, tissue, organs)
  • Cleared samples
  • SHG imaging
  • Live animal imaging

Technical Specifications:

  • Point Scan Multiphoton 2-200 FPS (Resonant, dependent on resolution)
  • Articulated rotation body, +/-45 degree rotation, 50x50x50mm XYZ range
  • Maximum 4k x 4k resolution, 1k x 1k typical
  • 720-1050nm laser tuning range
  • High Sensitivity GaAsP detectors (Blue/Green/Red/Far Red)

Type: In-Incubator phase and 2-color fluorescence microscope 

Modalities: Fluorescence and Phase Contrast imaging of well plates. 

Special Features: 

  • Incubated - maintains living samples at 37C with 5% CO2 

  • Two-color Green/Red fluorescence plus HD Phase imaging 
  • Long term imaging of multiple well plates 

 Optimized for: 

  • Short/Medium/Long-term Live observation 
  • Phase/Brightfield 

  • Fluorescence 

  • Organoids 
  • Scratch Wound 
  • Tiled FOV 
  • Chemotaxis 
  • Angiogenesis 

Technical Specifications: 

  • Magnification:  up to 20x 
  • Image Resolution:  0.61 microns/pixel (objective lens dependent) 
  • Image Format:  1392 x 1040 pixels 
  • Field of View:  0.85 x 0.63 mm (objective lens dependent) 
  • Fluorescence: Red, Green 
  • Phase Contrast 

Type: In-Incubator Fluorescence Microscopy 

Modalities: Fluorescence and Enhanced Widefield imaging of well plates. 

Special Features: 

  • Incubated - maintains living samples at 37C with 5% CO2 

  • Three-color Blue/Green/Red fluorescence and brightfield imaging 
  • Long term imaging of multiple well plates 

Optimized for: 

  • Short/Medium/Long-term Live observation 
  • Fluorescence 

  • Widefield enhanced contrast 
  • Organoids 
  • Scratch Wound 
  • Tiled FOV 
  • Chemotaxis 
  • Angiogenesis 

Technical Specifications: 

  • Magnification: 4X or 10X 
  • Image Resolution of 4X: 0.862 μm/pixel 
  • Field of View of 4X: 2.1 x 1.77 mm 
  • Image Resolution of 10X: 0.345 μm/pixel 
  • Field of View of 10X: 0.8 x 0.7 mm 
  • Camera Format: 2448 X 2048 pixels 
  • Channel blue (Ex 370-410 nm, Em 429-462 nm) 

  • Channel green (Ex 473-491 nm, Em 502-561 nm) 
  • Channel red (Ex 580-598 nm, Em 612-680 nm) 
Picture of Olympus Microscope

Ambreen Akhtar

Picture of Olympus Stereo Microscope

Ambreen Akhtar

Special Features:  

  • Leica DMI6000 B Inverted research level microscope with Adaptive Focus Control (AFC) and all fully motorized components including XY stage, piezo Z stage insert.  

  • Four different pinhole sizes for spinning disk t 

  • Equipped with differential interference contrast (DIC)  

  • Multi-modal optical head that is configured for Total Internal Reflection Fluorescence (TIRF), fast live-cell spinning disk confocal imaging and super-resolution.  

  • MetaMorph Super-Resolution System supports localization microscopy: PALM, STORM and dSTORM super-resolution techniques.  

  • Live cell instrumentation includes an advanced environmental system with CO2, heat and humidity control.  

Optimized for:  

  • TIRF, spinning disk and point localization microscopy 

  • Multi-color, 3D reconstruction and high-speed time-lapse.  

  • Live-cell microscopy 

Technical Specifications:  

  • 4 lasers for fluorescence excitation (405nm, 488nm, 561nm, and 637nm) and LED system for widefield fluorescence 

  • 2 Andor iXon Ultra 897 back-illuminated EMCCD cameras for simultaneous 2 color imaging as well as high resolution and low light scientific applications 

 


Note: The Quorum Diskovery System will be replaced by new equipment in Fall 2024. 

Picture of Spinning Disk Microscope

Ambreen Akhtar

Picture of Spinning Disk Microscope

Ambreen Akhtar

Type: Intravital microscopy 

Modalities:  Intravital imaging 

Special Features: 

  • Fully automated objective nosepiece, reflector turret and light path control 

  • Motorized stage (x, y)  

  • Motorized focus control (z) 

  • Environmental chamber control (temperature, CO2 and humidity) 

Optimized for: 

  • Brightfield, DIC and epifluorescence 

  • Live cell imaging 

  • Confocal optical sectioning 

  • Multi-channel imaging 

  • Timelapse 

  • Z-stack 

  • Tile scanning 

  • FRAP, FLIP, photo-conversion (405nm laser only) 

  • 3D d-STORM 

Technical Specifications: 

  • 4 laser lines: 405nm, 490nm, 561nm, 639nm 

  • Blue (Ex 360/20nm, FT 400nm, Em 425nm) 

  • Green (Ex 470/40nm, FT 510nm, Em 515nm) 

  • Red (538/44nm, FT 580nm, Em 590) 

  • Blue, green and red confocal filters  

  • EM-CCD camera: Hamamatsu EM-CCD ImagEM (512x512) 

  • sCMOS camera: Photometrics Prime BSI (1966x1966) [95% QE, back illuminated, 80fps] 

Picture of Olympus Stereo Microscope

Ambreen Akhtar

Type: White-light stereoscopic imaging 

Modalities: Stereomicroscope 

Special Features: 

  • 1X and 2X lenses 

  • UC50 Olympus colour camera  

  • White lamp illuminator 

Optimized for: 

  • Sample preparation 

  • Surgical and sample manipulation 

  • Inspection 

Technical Specifications: 

  • 1X and 2X lenses 

  • White lamp gooseneck illumination 

Type: Upright widefield with colour camera 

Modalities: White-light and polarized imaging 

Special Features: 

  • 5 MP QColor 5 Olympus colour camera 

  • Crossed Polarized imaging 

Optimized for: 

  • Slide mounted samples 

  • Birefringent samples (Polarization mode)  

Technical Specifications: 

  • 4x/10x/20x/40x objective lenses 

  • Crossed polarizer set for polarized imaging 

  • 5.0 Megapixel color camera for brightfield or polarization imaging